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Genome-wide identification and characterization of genes encoding cyclohexylamine degradation in a novel cyclohexylamine-degrading bacterial strain of Pseudomonas plecoglossicida NyZ12

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成果类型:
期刊论文
作者:
Yan, Da-Zhong*;Li, Xin;Li, Cun-Zhi;Mao, Ling-Qi;Chi, Xiang-Qun;...
通讯作者:
Yan, Da-Zhong
作者机构:
[Li, Cun-Zhi; Mao, Ling-Qi; Yan, Da-Zhong; Li, Xin] Wuhan Polytech Univ, Sch Biol & Pharmaceut Engn, Wuhan 430023, Peoples R China.
[Chi, Xiang-Qun; Zhou, Ning-Yi] Chinese Acad Sci, Wuhan Inst Virol, Wuhan 430071, Peoples R China.
[Zhou, Ning-Yi] Shanghai Jiao Tong Univ, State Key Lab Microbial Metab, Shanghai 200240, Peoples R China.
[Zhou, Ning-Yi] Shanghai Jiao Tong Univ, Sch Life Sci & Biotechnol, Shanghai 200240, Peoples R China.
[Liu, Dong-Yan] Shanghai Normal Univ, Coll Life & Environm Sci, Shanghai 200234, Peoples R China.
通讯机构:
[Yan, Da-Zhong] W
Wuhan Polytech Univ, Sch Biol & Pharmaceut Engn, Wuhan 430023, Peoples R China.
语种:
英文
关键词:
Catabolism;Cyclohexanone;Cyclohexylamine;Cyclohexylamine oxidase;Pseudomonas plecoglossicida NyZ12
期刊:
Journal of Biotechnology
ISSN:
0168-1656
年:
2017
卷:
251
页码:
166-173
基金类别:
This work was financially supported by the National Natural Science Foundation of China (31270112) and State Key Laboratory of Microbial Metabolism (Shanghai Jiao Tong University) (MMLKF14-06), respectively. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. Author contributions Conceptualization: DZY Validation: CZL LQM DZY Formal analysis: DZY XQC Investigation: LQM CZL Resources: DZY NYZ Data curation: DZY Writing (original draft preparation): DZY XL DYL Writing (review and editing): DZY NYZ Supervision: DZY Project administration: DZY acquisition: DZY
机构署名:
本校为第一且通讯机构
院系归属:
生命科学与技术学院
摘要:
The Gram-negative strain of Pseudomonas plecoglossicida NyZ12 isolated from soil has the ability to degrade cyclohexylamine (CHAM). The genes encoding CHAM degradation by gram-negative bacteria, however, have not been reported previously. In this study, ORFs predicted to encode CHAM degradation by NyZ12 were identified by bioinformatics analysis. Differential expression of the proposed ORFs was analyzed via RNA-seq and quantitative reverse transcription-PCR (qRT-PCR), using RNA extracted from NyZ12 cultured with or without CHAM addition. One CHAM-inducible ORF, RK21_02867 predicted to encode a...

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