Full-length transcriptome sequencing and modular organization analysis of oleanolic acid- and dammarane-type saponins related gene expression patterns in Panax japonicus

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成果类型：

期刊论文

作者：

Xu, Ran;Zhang, Jiao;You, Jingmao;Gao, Limei;Li, Yongchang;...

通讯作者：

Liu, Zhiguo;Guo, Jie

作者机构：

[Zhang, Jiao; Xu, Ran; Zhu, Wenjun; Chen, Ping; Liu, Zhiguo; Zhang, Shaopeng; Xiong, Chao] Wuhan Polytech Univ, Sch Biol & Pharmaceut Engn, Wuhan 430023, Peoples R China.

[Guo, Jie; You, Jingmao] Hubei Acad Agr Sci, Inst Chinese Herbal Med, Enshi 445000, Peoples R China.

[Xiong, Hui; Gao, Limei] South Cent Univ Nationalities, Sch Pharmaceut Sci, Wuhan 430074, Peoples R China.

[Li, Yongchang] Kansas City Univ Med & Biosci, Joplin, MO 64804 USA.

[Shu, Shaohua] Huazhong Agr Univ, Sch Plant Sci & Technol, Wuhan 430070, Peoples R China.

通讯机构：

[Liu, Zhiguo] W

[Guo, Jie] H

Wuhan Polytech Univ, Sch Biol & Pharmaceut Engn, Wuhan 430023, Peoples R China.

Hubei Acad Agr Sci, Inst Chinese Herbal Med, Enshi 445000, Peoples R China.

语种：

英文

关键词：

Panax japonicus;Saponin distribution;Biosynthesis;Rhizoma and root tissues;Metabolome;Full-length transcriptome

期刊：

Genomics

ISSN：

0888-7543

年：

2020

卷：

112

期：

页码：

4137-4147

DOI：

10.1016/j.ygeno.2020.06.045

基金类别：

National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [81903782, 31600272]; Nature Science Foundation of Hubei ProvinceNatural Science Foundation of Hubei Province [2018CFB565]

机构署名：

本校为第一且通讯机构

院系归属：

生命科学与技术学院

摘要：

The saponins found in Panax japonicus, a traditional medicinal herb in Asia, exhibit high degrees of structural and functional similarity. In this study, metabolite analysis revealed that oleanolic acid-type and dammarane-type saponins were distributed unevenly in three tissues (rhizome_Y, rhizome_O, and secRoot) of P. japonicus. Single-molecule real-time (SMRT) sequencing and next generation sequencing (NGS) data revealed distinct and tissue-specific transcriptomic patterns relating to the production of these two types of saponins. In the co-e...

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Full-length transcriptome sequencing and modular organization analysis of oleanolic acid- and dammarane-type saponins related gene expression patterns in Panax japonicus

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